Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus.phenotype_BT_ATM_minus_versus_ATM_plus.cls #BT_ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_BT_ATM_minus_versus_ATM_plus.cls#BT_ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | BIOCARTA_CADMIUM INDUCES DNA SYNTHESIS AND PROLIFERATION IN MACROPHAGES |
| Enrichment Score (ES) | -0.6582988 |
| Normalized Enrichment Score (NES) | -1.7182962 |
| Nominal p-value | 0.009025271 |
| FDR q-value | 0.20477623 |
| FWER p-Value | 0.935 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PLCB1 | 1421170_a_at 1425600_a_at 1425781_a_at 1425782_at 1435043_at 1447004_at | 3148 | 0.620 | -0.0844 | No | ||
| 2 | JUN | 1417409_at 1448694_at | 8322 | 0.132 | -0.3078 | No | ||
| 3 | HRAS | 1422407_s_at 1424132_at | 8526 | 0.118 | -0.3057 | No | ||
| 4 | PRKCA | 1427562_a_at 1443069_at 1445028_at 1445395_at 1446598_at 1450945_at | 10542 | -0.008 | -0.3969 | No | ||
| 5 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 11428 | -0.064 | -0.4312 | No | ||
| 6 | CUZD1 | 1417413_at | 12981 | -0.160 | -0.4867 | No | ||
| 7 | RAF1 | 1416078_s_at 1425419_a_at | 13151 | -0.171 | -0.4781 | No | ||
| 8 | MAP2K2 | 1415974_at 1443436_at 1460636_at | 15015 | -0.301 | -0.5343 | No | ||
| 9 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 16399 | -0.411 | -0.5581 | No | ||
| 10 | RELA | 1419536_a_at | 18597 | -0.667 | -0.5946 | Yes | ||
| 11 | MAPK3 | 1427060_at | 18852 | -0.706 | -0.5388 | Yes | ||
| 12 | TNF | 1419607_at | 19120 | -0.750 | -0.4793 | Yes | ||
| 13 | MYC | 1424942_a_at | 21058 | -1.289 | -0.4445 | Yes | ||
| 14 | MAP2K1 | 1416351_at | 21251 | -1.424 | -0.3171 | Yes | ||
| 15 | FOS | 1423100_at | 21901 | -3.644 | 0.0015 | Yes |
